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Cluster: HRGMv2_2390_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2390_9 HRGMv2_2390_9_15 11191 12045 - 3.A.1.132.3
TC HRGMv2_2390_9 HRGMv2_2390_9_16 12132 13889 - 1.A.33.1.4
STP HRGMv2_2390_9 HRGMv2_2390_9_17 14153 15565 - Pribosyltran
CAZyme HRGMv2_2390_9 HRGMv2_2390_9_18 15935 18058 + GH13_11
sulfatase HRGMv2_2390_9 HRGMv2_2390_9_19 19295 20482 - S1_7
TC HRGMv2_2390_9 HRGMv2_2390_9_20 20634 22511 - 1.A.33.1.4
pfam HRGMv2_2390_9 HRGMv2_2390_9_21 22654 23319 - GrpE
TF HRGMv2_2390_9 HRGMv2_2390_9_22 23335 24384 - 0043758
CAZyme HRGMv2_2390_9 HRGMv2_2390_9_23 24672 29645 - GH111
Gene ID: HRGMv2_2390_9_15
Type: TC
Location: 11191 - 12045 (-)
Gene ID: HRGMv2_2390_9_16
Type: TC
Location: 12132 - 13889 (-)
Gene ID: HRGMv2_2390_9_17
Type: STP
Location: 14153 - 15565 (-)
Gene ID: HRGMv2_2390_9_18
Type: CAZyme
Location: 15935 - 18058 (+)
Gene ID: HRGMv2_2390_9_19
Type: sulfatase
Location: 19295 - 20482 (-)
Gene ID: HRGMv2_2390_9_20
Type: TC
Location: 20634 - 22511 (-)
Gene ID: HRGMv2_2390_9_21
Type: pfam
Location: 22654 - 23319 (-)
Gene ID: HRGMv2_2390_9_22
Type: TF
Location: 23335 - 24384 (-)
Gene ID: HRGMv2_2390_9_23
Type: CAZyme
Location: 24672 - 29645 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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