Cluster: HRGMv2_2390_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_6 | HRGMv2_2390_6_44 | 42365 | 43096 | + | 3.A.1.142.1 |
| NULL(UNKNOWN) | HRGMv2_2390_6 | HRGMv2_2390_6_45 | 43093 | 43590 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2390_6 | HRGMv2_2390_6_46 | 43772 | 44644 | - | Metallophos |
| CAZyme | HRGMv2_2390_6 | HRGMv2_2390_6_47 | 44819 | 47551 | - | CE8 |
| CAZyme | HRGMv2_2390_6 | HRGMv2_2390_6_48 | 47840 | 48802 | + | GH25 |
Gene ID: HRGMv2_2390_6_44
Type: TC
Location: 42365 - 43096 (+)
Type: TC
Location: 42365 - 43096 (+)
Gene ID: HRGMv2_2390_6_45
Type:
Location: 43093 - 43590 (+)
Type:
Location: 43093 - 43590 (+)
Gene ID: HRGMv2_2390_6_46
Type: pfam
Location: 43772 - 44644 (-)
Type: pfam
Location: 43772 - 44644 (-)
Gene ID: HRGMv2_2390_6_47
Type: CAZyme
Location: 44819 - 47551 (-)
Type: CAZyme
Location: 44819 - 47551 (-)
Gene ID: HRGMv2_2390_6_48
Type: CAZyme
Location: 47840 - 48802 (+)
Type: CAZyme
Location: 47840 - 48802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.