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Cluster: HRGMv2_2377_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2377_5 HRGMv2_2377_5_108 96291 97484 + 2.A.4.7.4
pfam HRGMv2_2377_5 HRGMv2_2377_5_109 97456 98178 - adh_short | KR | adh_short_C2
pfam HRGMv2_2377_5 HRGMv2_2377_5_110 98823 99353 + Ribosomal_S30AE | Ribosom_S30AE_C
TC HRGMv2_2377_5 HRGMv2_2377_5_111 99538 102102 + 3.A.5.1.3
pfam HRGMv2_2377_5 HRGMv2_2377_5_112 102115 103239 + RF-1 | PCRF
STP HRGMv2_2377_5 HRGMv2_2377_5_113 103281 103742 + CheW
CAZyme HRGMv2_2377_5 HRGMv2_2377_5_114 103742 105355 + GH77
Gene ID: HRGMv2_2377_5_108
Type: TC
Location: 96291 - 97484 (+)
Gene ID: HRGMv2_2377_5_109
Type: pfam
Location: 97456 - 98178 (-)
Gene ID: HRGMv2_2377_5_110
Type: pfam
Location: 98823 - 99353 (+)
Gene ID: HRGMv2_2377_5_111
Type: TC
Location: 99538 - 102102 (+)
Gene ID: HRGMv2_2377_5_112
Type: pfam
Location: 102115 - 103239 (+)
Gene ID: HRGMv2_2377_5_113
Type: STP
Location: 103281 - 103742 (+)
Gene ID: HRGMv2_2377_5_114
Type: CAZyme
Location: 103742 - 105355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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