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Cluster: HRGMv2_2377_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_5 HRGMv2_2377_5_24 25486 26703 + GT101
pfam HRGMv2_2377_5 HRGMv2_2377_5_25 26728 27837 + Methyltransf_21
pfam HRGMv2_2377_5 HRGMv2_2377_5_26 27849 29015 + Radical_SAM
CAZyme HRGMv2_2377_5 HRGMv2_2377_5_27 29061 30269 + GT2
CAZyme HRGMv2_2377_5 HRGMv2_2377_5_28 30297 31475 + GT2
CAZyme HRGMv2_2377_5 HRGMv2_2377_5_29 31507 32907 + GT113
pfam HRGMv2_2377_5 HRGMv2_2377_5_30 33048 34094 + Methyltransf_21
pfam HRGMv2_2377_5 HRGMv2_2377_5_31 34139 36514 + CTP_transf_like
TC HRGMv2_2377_5 HRGMv2_2377_5_32 36534 37895 + 2.A.66.1.26
Gene ID: HRGMv2_2377_5_24
Type: CAZyme
Location: 25486 - 26703 (+)
Gene ID: HRGMv2_2377_5_25
Type: pfam
Location: 26728 - 27837 (+)
Gene ID: HRGMv2_2377_5_26
Type: pfam
Location: 27849 - 29015 (+)
Gene ID: HRGMv2_2377_5_27
Type: CAZyme
Location: 29061 - 30269 (+)
Gene ID: HRGMv2_2377_5_28
Type: CAZyme
Location: 30297 - 31475 (+)
Gene ID: HRGMv2_2377_5_29
Type: CAZyme
Location: 31507 - 32907 (+)
Gene ID: HRGMv2_2377_5_30
Type: pfam
Location: 33048 - 34094 (+)
Gene ID: HRGMv2_2377_5_31
Type: pfam
Location: 34139 - 36514 (+)
Gene ID: HRGMv2_2377_5_32
Type: TC
Location: 36534 - 37895 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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