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Cluster: HRGMv2_2377_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2377_4 HRGMv2_2377_4_25 27079 27852 - 2.A.79.1.4
TC HRGMv2_2377_4 HRGMv2_2377_4_26 28015 28332 - 2.A.78.1.1
TC HRGMv2_2377_4 HRGMv2_2377_4_27 28347 28922 - 2.A.115.2.14
TC HRGMv2_2377_4 HRGMv2_2377_4_28 29020 29721 - 2.A.122.1.4
TC HRGMv2_2377_4 HRGMv2_2377_4_29 29714 30088 - 1.E.14.1.1
CAZyme HRGMv2_2377_4 HRGMv2_2377_4_30 30116 31063 - GT8
NULL(UNKNOWN) HRGMv2_2377_4 HRGMv2_2377_4_31 31334 32317 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2377_4 HRGMv2_2377_4_32 32412 32795 - 3.A.1.124.2
NULL(UNKNOWN) HRGMv2_2377_4 HRGMv2_2377_4_33 32770 33225 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2377_4 HRGMv2_2377_4_34 33531 34247 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2377_4 HRGMv2_2377_4_35 34237 34896 - 3.A.1.124.4
Gene ID: HRGMv2_2377_4_25
Type: TC
Location: 27079 - 27852 (-)
Gene ID: HRGMv2_2377_4_26
Type: TC
Location: 28015 - 28332 (-)
Gene ID: HRGMv2_2377_4_27
Type: TC
Location: 28347 - 28922 (-)
Gene ID: HRGMv2_2377_4_28
Type: TC
Location: 29020 - 29721 (-)
Gene ID: HRGMv2_2377_4_29
Type: TC
Location: 29714 - 30088 (-)
Gene ID: HRGMv2_2377_4_30
Type: CAZyme
Location: 30116 - 31063 (-)
Gene ID: HRGMv2_2377_4_31
Type:
Location: 31334 - 32317 (+)
Gene ID: HRGMv2_2377_4_32
Type: TC
Location: 32412 - 32795 (-)
Gene ID: HRGMv2_2377_4_33
Type:
Location: 32770 - 33225 (-)
Gene ID: HRGMv2_2377_4_34
Type:
Location: 33531 - 34247 (-)
Gene ID: HRGMv2_2377_4_35
Type: TC
Location: 34237 - 34896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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