Cluster: HRGMv2_2377_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2377
- CGC Family ID: CGCFAM_05330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2377_25 | HRGMv2_2377_25_17 | 27004 | 28806 | + | GH25 |
| TC | HRGMv2_2377_25 | HRGMv2_2377_25_18 | 29218 | 30588 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | HRGMv2_2377_25 | HRGMv2_2377_25_19 | 31250 | 31681 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2377_25 | HRGMv2_2377_25_20 | 31715 | 32593 | - | 2.A.115.1.1 |
Gene ID: HRGMv2_2377_25_17
Type: CAZyme
Location: 27004 - 28806 (+)
Type: CAZyme
Location: 27004 - 28806 (+)
Gene ID: HRGMv2_2377_25_18
Type: TC
Location: 29218 - 30588 (-)
Type: TC
Location: 29218 - 30588 (-)
Gene ID: HRGMv2_2377_25_19
Type:
Location: 31250 - 31681 (-)
Type:
Location: 31250 - 31681 (-)
Gene ID: HRGMv2_2377_25_20
Type: TC
Location: 31715 - 32593 (-)
Type: TC
Location: 31715 - 32593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900547255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.