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Cluster: HRGMv2_2377_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_22 HRGMv2_2377_22_28 32047 33321 + GH140
pfam HRGMv2_2377_22 HRGMv2_2377_22_29 33302 33811 - UDG
TC HRGMv2_2377_22 HRGMv2_2377_22_30 33815 35563 - 3.A.1.1.9
TC HRGMv2_2377_22 HRGMv2_2377_22_31 35567 36415 - 3.A.1.1.27
TC HRGMv2_2377_22 HRGMv2_2377_22_32 36412 37752 - 3.A.1.1.27
pfam HRGMv2_2377_22 HRGMv2_2377_22_33 37830 39098 - SBP_bac_8
TC HRGMv2_2377_22 HRGMv2_2377_22_34 39251 41107 - 9.B.33.1.1
TF HRGMv2_2377_22 HRGMv2_2377_22_35 41067 42623 - HTH_AraC
CAZyme HRGMv2_2377_22 HRGMv2_2377_22_36 42774 45119 - GT35
TF HRGMv2_2377_22 HRGMv2_2377_22_37 45267 46145 + HTH_AraC | HTH_AraC
pfam HRGMv2_2377_22 HRGMv2_2377_22_38 46149 47357 - NAPRTase | NAPRTase_N
CAZyme HRGMv2_2377_22 HRGMv2_2377_22_39 47741 48709 + CE12
Gene ID: HRGMv2_2377_22_28
Type: CAZyme
Location: 32047 - 33321 (+)
Gene ID: HRGMv2_2377_22_29
Type: pfam
Location: 33302 - 33811 (-)
Gene ID: HRGMv2_2377_22_30
Type: TC
Location: 33815 - 35563 (-)
Gene ID: HRGMv2_2377_22_31
Type: TC
Location: 35567 - 36415 (-)
Gene ID: HRGMv2_2377_22_32
Type: TC
Location: 36412 - 37752 (-)
Gene ID: HRGMv2_2377_22_33
Type: pfam
Location: 37830 - 39098 (-)
Gene ID: HRGMv2_2377_22_34
Type: TC
Location: 39251 - 41107 (-)
Gene ID: HRGMv2_2377_22_35
Type: TF
Location: 41067 - 42623 (-)
Gene ID: HRGMv2_2377_22_36
Type: CAZyme
Location: 42774 - 45119 (-)
Gene ID: HRGMv2_2377_22_37
Type: TF
Location: 45267 - 46145 (+)
Gene ID: HRGMv2_2377_22_38
Type: pfam
Location: 46149 - 47357 (-)
Gene ID: HRGMv2_2377_22_39
Type: CAZyme
Location: 47741 - 48709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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