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Cluster: HRGMv2_2377_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_22 HRGMv2_2377_22_17 20648 21502 + CE4
pfam HRGMv2_2377_22 HRGMv2_2377_22_18 21499 22665 - MFS_1
pfam HRGMv2_2377_22 HRGMv2_2377_22_19 22824 24089 - Glyco_trans_1_2
TC HRGMv2_2377_22 HRGMv2_2377_22_20 24091 24918 - 3.A.1.132.3
TC HRGMv2_2377_22 HRGMv2_2377_22_21 24936 25697 - 1.A.16.3.2
NULL(UNKNOWN) HRGMv2_2377_22 HRGMv2_2377_22_22 25883 26086 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2377_22 HRGMv2_2377_22_23 26087 26932 - 3.A.1.15.5
TC HRGMv2_2377_22 HRGMv2_2377_22_24 26925 27635 - 3.A.1.15.8
Gene ID: HRGMv2_2377_22_17
Type: CAZyme
Location: 20648 - 21502 (+)
Gene ID: HRGMv2_2377_22_18
Type: pfam
Location: 21499 - 22665 (-)
Gene ID: HRGMv2_2377_22_19
Type: pfam
Location: 22824 - 24089 (-)
Gene ID: HRGMv2_2377_22_20
Type: TC
Location: 24091 - 24918 (-)
Gene ID: HRGMv2_2377_22_21
Type: TC
Location: 24936 - 25697 (-)
Gene ID: HRGMv2_2377_22_22
Type:
Location: 25883 - 26086 (+)
Gene ID: HRGMv2_2377_22_23
Type: TC
Location: 26087 - 26932 (-)
Gene ID: HRGMv2_2377_22_24
Type: TC
Location: 26925 - 27635 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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