Cluster: HRGMv2_2377_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2377
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2377_20 | HRGMv2_2377_20_31 | 28353 | 29261 | - | 1.A.23.2.1 |
| CAZyme | HRGMv2_2377_20 | HRGMv2_2377_20_32 | 29284 | 31584 | - | GH13_9 |
| peptidase | HRGMv2_2377_20 | HRGMv2_2377_20_33 | 31610 | 32455 | - | S09.UPW |
| pfam | HRGMv2_2377_20 | HRGMv2_2377_20_34 | 32517 | 33752 | - | DUF1015 |
| TC | HRGMv2_2377_20 | HRGMv2_2377_20_35 | 33770 | 35278 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2377_20_31
Type: TC
Location: 28353 - 29261 (-)
Type: TC
Location: 28353 - 29261 (-)
Gene ID: HRGMv2_2377_20_32
Type: CAZyme
Location: 29284 - 31584 (-)
Type: CAZyme
Location: 29284 - 31584 (-)
Gene ID: HRGMv2_2377_20_33
Type: peptidase
Location: 31610 - 32455 (-)
Type: peptidase
Location: 31610 - 32455 (-)
Gene ID: HRGMv2_2377_20_34
Type: pfam
Location: 32517 - 33752 (-)
Type: pfam
Location: 32517 - 33752 (-)
Gene ID: HRGMv2_2377_20_35
Type: TC
Location: 33770 - 35278 (-)
Type: TC
Location: 33770 - 35278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900547255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.