Cluster: HRGMv2_2377_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2377
- CGC Family ID: CGCFAM_10058
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2377_19 | HRGMv2_2377_19_33 | 29006 | 30424 | + | 2.A.25.1.4 |
| TC | HRGMv2_2377_19 | HRGMv2_2377_19_34 | 30446 | 32902 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_2377_19 | HRGMv2_2377_19_35 | 33085 | 33570 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2377_19 | HRGMv2_2377_19_36 | 34087 | 34953 | + | Aldose_epim |
| CAZyme | HRGMv2_2377_19 | HRGMv2_2377_19_37 | 35069 | 38644 | + | PL9_1 |
Gene ID: HRGMv2_2377_19_33
Type: TC
Location: 29006 - 30424 (+)
Type: TC
Location: 29006 - 30424 (+)
Gene ID: HRGMv2_2377_19_34
Type: TC
Location: 30446 - 32902 (+)
Type: TC
Location: 30446 - 32902 (+)
Gene ID: HRGMv2_2377_19_35
Type:
Location: 33085 - 33570 (+)
Type:
Location: 33085 - 33570 (+)
Gene ID: HRGMv2_2377_19_36
Type: pfam
Location: 34087 - 34953 (+)
Type: pfam
Location: 34087 - 34953 (+)
Gene ID: HRGMv2_2377_19_37
Type: CAZyme
Location: 35069 - 38644 (+)
Type: CAZyme
Location: 35069 - 38644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900547255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.