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Cluster: HRGMv2_2377_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_17 HRGMv2_2377_17_39 46033 47448 + GT4
pfam HRGMv2_2377_17 HRGMv2_2377_17_40 47464 48942 + PelG
pfam HRGMv2_2377_17 HRGMv2_2377_17_41 48939 49319 + DUF2304
CAZyme HRGMv2_2377_17 HRGMv2_2377_17_42 49332 50549 + GT4
CAZyme HRGMv2_2377_17 HRGMv2_2377_17_43 50573 51343 + GT2
pfam HRGMv2_2377_17 HRGMv2_2377_17_44 51336 52520 + DUF4832 | DUF4874
pfam HRGMv2_2377_17 HRGMv2_2377_17_45 52473 53951 - DUF4832 | DUF4874
TC HRGMv2_2377_17 HRGMv2_2377_17_46 54051 55610 + 2.A.66.1.40
pfam HRGMv2_2377_17 HRGMv2_2377_17_47 55603 56817 + NTP_transf_5
STP HRGMv2_2377_17 HRGMv2_2377_17_48 56838 57782 + GGDEF
TC HRGMv2_2377_17 HRGMv2_2377_17_49 57785 58723 + 3.A.11.1.4
Gene ID: HRGMv2_2377_17_39
Type: CAZyme
Location: 46033 - 47448 (+)
Gene ID: HRGMv2_2377_17_40
Type: pfam
Location: 47464 - 48942 (+)
Gene ID: HRGMv2_2377_17_41
Type: pfam
Location: 48939 - 49319 (+)
Gene ID: HRGMv2_2377_17_42
Type: CAZyme
Location: 49332 - 50549 (+)
Gene ID: HRGMv2_2377_17_43
Type: CAZyme
Location: 50573 - 51343 (+)
Gene ID: HRGMv2_2377_17_44
Type: pfam
Location: 51336 - 52520 (+)
Gene ID: HRGMv2_2377_17_45
Type: pfam
Location: 52473 - 53951 (-)
Gene ID: HRGMv2_2377_17_46
Type: TC
Location: 54051 - 55610 (+)
Gene ID: HRGMv2_2377_17_47
Type: pfam
Location: 55603 - 56817 (+)
Gene ID: HRGMv2_2377_17_48
Type: STP
Location: 56838 - 57782 (+)
Gene ID: HRGMv2_2377_17_49
Type: TC
Location: 57785 - 58723 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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