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Cluster: HRGMv2_2377_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_17 HRGMv2_2377_17_18 17373 18746 - GH1
CAZyme HRGMv2_2377_17 HRGMv2_2377_17_19 18764 21220 - GH94
TF HRGMv2_2377_17 HRGMv2_2377_17_20 21546 22541 + LacI
NULL(UNKNOWN) HRGMv2_2377_17 HRGMv2_2377_17_21 22588 23955 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2377_17 HRGMv2_2377_17_22 24036 24986 + 3.A.1.1.4
TC HRGMv2_2377_17 HRGMv2_2377_17_23 24983 25873 + 3.A.1.1.48
pfam HRGMv2_2377_17 HRGMv2_2377_17_24 26009 26497 - Tyr_Deacylase
pfam HRGMv2_2377_17 HRGMv2_2377_17_25 26592 27107 + DUF6512
TC HRGMv2_2377_17 HRGMv2_2377_17_26 27223 27987 + 3.A.1.7.5
Gene ID: HRGMv2_2377_17_18
Type: CAZyme
Location: 17373 - 18746 (-)
Gene ID: HRGMv2_2377_17_19
Type: CAZyme
Location: 18764 - 21220 (-)
Gene ID: HRGMv2_2377_17_20
Type: TF
Location: 21546 - 22541 (+)
Gene ID: HRGMv2_2377_17_21
Type:
Location: 22588 - 23955 (+)
Gene ID: HRGMv2_2377_17_22
Type: TC
Location: 24036 - 24986 (+)
Gene ID: HRGMv2_2377_17_23
Type: TC
Location: 24983 - 25873 (+)
Gene ID: HRGMv2_2377_17_24
Type: pfam
Location: 26009 - 26497 (-)
Gene ID: HRGMv2_2377_17_25
Type: pfam
Location: 26592 - 27107 (+)
Gene ID: HRGMv2_2377_17_26
Type: TC
Location: 27223 - 27987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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