dbCAN Logo

Cluster: HRGMv2_2377_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2377_11 HRGMv2_2377_11_15 14909 15595 + 3.A.2.1.5
TC HRGMv2_2377_11 HRGMv2_2377_11_16 15652 15879 + 3.A.2.1.5
pfam HRGMv2_2377_11 HRGMv2_2377_11_17 15987 16439 + ATP-synt_B
pfam HRGMv2_2377_11 HRGMv2_2377_11_18 16417 16926 + OSCP
TC HRGMv2_2377_11 HRGMv2_2377_11_19 16939 18438 + 3.A.2.1.6
TC HRGMv2_2377_11 HRGMv2_2377_11_20 18464 19357 + 3.A.2.1.5
TC HRGMv2_2377_11 HRGMv2_2377_11_21 19417 20805 + 3.A.2.1.5
pfam HRGMv2_2377_11 HRGMv2_2377_11_22 20934 21344 + ATP-synt_DE | ATP-synt_DE_N
CAZyme HRGMv2_2377_11 HRGMv2_2377_11_23 21871 23367 + GH25
NULL(UNKNOWN) HRGMv2_2377_11 HRGMv2_2377_11_24 23461 23727 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2377_11 HRGMv2_2377_11_25 24171 29561 + PL9_1
STP HRGMv2_2377_11 HRGMv2_2377_11_26 29749 30270 + Nitroreductase | Nitroreductase
TC HRGMv2_2377_11 HRGMv2_2377_11_27 30460 32169 + 1.B.52.2.1
Gene ID: HRGMv2_2377_11_15
Type: TC
Location: 14909 - 15595 (+)
Gene ID: HRGMv2_2377_11_16
Type: TC
Location: 15652 - 15879 (+)
Gene ID: HRGMv2_2377_11_17
Type: pfam
Location: 15987 - 16439 (+)
Gene ID: HRGMv2_2377_11_18
Type: pfam
Location: 16417 - 16926 (+)
Gene ID: HRGMv2_2377_11_19
Type: TC
Location: 16939 - 18438 (+)
Gene ID: HRGMv2_2377_11_20
Type: TC
Location: 18464 - 19357 (+)
Gene ID: HRGMv2_2377_11_21
Type: TC
Location: 19417 - 20805 (+)
Gene ID: HRGMv2_2377_11_22
Type: pfam
Location: 20934 - 21344 (+)
Gene ID: HRGMv2_2377_11_23
Type: CAZyme
Location: 21871 - 23367 (+)
Gene ID: HRGMv2_2377_11_24
Type:
Location: 23461 - 23727 (-)
Gene ID: HRGMv2_2377_11_25
Type: CAZyme
Location: 24171 - 29561 (+)
Gene ID: HRGMv2_2377_11_26
Type: STP
Location: 29749 - 30270 (+)
Gene ID: HRGMv2_2377_11_27
Type: TC
Location: 30460 - 32169 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2377_11_22 vegetarian > vegan 1.25075 0.02371

🧭 Explore Read Mapping of CGC

← Back to Cluster List