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Cluster: HRGMv2_2377_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2377_10 HRGMv2_2377_10_10 7668 8141 + 9.A.11.1.1
TC HRGMv2_2377_10 HRGMv2_2377_10_11 8161 9180 + 9.A.11.1.1
pfam HRGMv2_2377_10 HRGMv2_2377_10_12 9152 9541 + SpoVAC_SpoVAEB
CAZyme HRGMv2_2377_10 HRGMv2_2377_10_13 9602 12394 - GT51
pfam HRGMv2_2377_10 HRGMv2_2377_10_14 12583 13221 + UPF0029 | DUF1949
NULL(UNKNOWN) HRGMv2_2377_10 HRGMv2_2377_10_15 13604 15190 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2377_10 HRGMv2_2377_10_16 15335 16804 + 3.A.1.1.29
TC HRGMv2_2377_10 HRGMv2_2377_10_17 16818 17681 + 3.A.1.1.29
CAZyme HRGMv2_2377_10 HRGMv2_2377_10_18 17914 19869 + CBM91 | GH43_12
CAZyme HRGMv2_2377_10 HRGMv2_2377_10_19 19901 20803 + GH105
CAZyme HRGMv2_2377_10 HRGMv2_2377_10_20 20794 22350 + GH28
TC HRGMv2_2377_10 HRGMv2_2377_10_21 22358 24148 + 3.A.1.106.2
Gene ID: HRGMv2_2377_10_10
Type: TC
Location: 7668 - 8141 (+)
Gene ID: HRGMv2_2377_10_11
Type: TC
Location: 8161 - 9180 (+)
Gene ID: HRGMv2_2377_10_12
Type: pfam
Location: 9152 - 9541 (+)
Gene ID: HRGMv2_2377_10_13
Type: CAZyme
Location: 9602 - 12394 (-)
Gene ID: HRGMv2_2377_10_14
Type: pfam
Location: 12583 - 13221 (+)
Gene ID: HRGMv2_2377_10_15
Type:
Location: 13604 - 15190 (+)
Gene ID: HRGMv2_2377_10_16
Type: TC
Location: 15335 - 16804 (+)
Gene ID: HRGMv2_2377_10_17
Type: TC
Location: 16818 - 17681 (+)
Gene ID: HRGMv2_2377_10_18
Type: CAZyme
Location: 17914 - 19869 (+)
Gene ID: HRGMv2_2377_10_19
Type: CAZyme
Location: 19901 - 20803 (+)
Gene ID: HRGMv2_2377_10_20
Type: CAZyme
Location: 20794 - 22350 (+)
Gene ID: HRGMv2_2377_10_21
Type: TC
Location: 22358 - 24148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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