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Cluster: HRGMv2_2377_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2377_7 HRGMv2_2377_7_70 68050 69345 + GT2
TC HRGMv2_2377_7 HRGMv2_2377_7_71 69438 69947 - 2.A.87.3.3
pfam HRGMv2_2377_7 HRGMv2_2377_7_72 69990 70373 - NusG_II
STP HRGMv2_2377_7 HRGMv2_2377_7_73 70493 71287 - FeS | Fer4 | Fer4
TC HRGMv2_2377_7 HRGMv2_2377_7_74 71306 71878 - 3.D.6.1.2
TC HRGMv2_2377_7 HRGMv2_2377_7_75 71891 72559 - 3.D.6.1.2
TC HRGMv2_2377_7 HRGMv2_2377_7_76 72552 73190 - 3.D.6.1.2
TC HRGMv2_2377_7 HRGMv2_2377_7_77 73192 74157 - 3.D.6.1.2
TC HRGMv2_2377_7 HRGMv2_2377_7_78 74170 75486 - 3.D.6.1.2
Gene ID: HRGMv2_2377_7_70
Type: CAZyme
Location: 68050 - 69345 (+)
Gene ID: HRGMv2_2377_7_71
Type: TC
Location: 69438 - 69947 (-)
Gene ID: HRGMv2_2377_7_72
Type: pfam
Location: 69990 - 70373 (-)
Gene ID: HRGMv2_2377_7_73
Type: STP
Location: 70493 - 71287 (-)
Gene ID: HRGMv2_2377_7_74
Type: TC
Location: 71306 - 71878 (-)
Gene ID: HRGMv2_2377_7_75
Type: TC
Location: 71891 - 72559 (-)
Gene ID: HRGMv2_2377_7_76
Type: TC
Location: 72552 - 73190 (-)
Gene ID: HRGMv2_2377_7_77
Type: TC
Location: 73192 - 74157 (-)
Gene ID: HRGMv2_2377_7_78
Type: TC
Location: 74170 - 75486 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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