Cluster: HRGMv2_2377_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2377
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2377_7 | HRGMv2_2377_7_61 | 58026 | 58598 | - | GH23 |
| STP | HRGMv2_2377_7 | HRGMv2_2377_7_62 | 58598 | 59032 | - | NUDIX |
| pfam | HRGMv2_2377_7 | HRGMv2_2377_7_63 | 59118 | 60572 | - | Transpeptidase | PBP_dimer_2 |
| TC | HRGMv2_2377_7 | HRGMv2_2377_7_64 | 60538 | 61881 | - | 2.A.103.1.7 |
Gene ID: HRGMv2_2377_7_61
Type: CAZyme
Location: 58026 - 58598 (-)
Type: CAZyme
Location: 58026 - 58598 (-)
Gene ID: HRGMv2_2377_7_62
Type: STP
Location: 58598 - 59032 (-)
Type: STP
Location: 58598 - 59032 (-)
Gene ID: HRGMv2_2377_7_63
Type: pfam
Location: 59118 - 60572 (-)
Type: pfam
Location: 59118 - 60572 (-)
Gene ID: HRGMv2_2377_7_64
Type: TC
Location: 60538 - 61881 (-)
Type: TC
Location: 60538 - 61881 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900547255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.