Cluster: HRGMv2_2377_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2377
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2377_1 | HRGMv2_2377_1_81 | 74994 | 75710 | - | CE4 |
| pfam | HRGMv2_2377_1 | HRGMv2_2377_1_82 | 75785 | 76282 | - | CarD_TRCF_RID | CarD_C |
| pfam | HRGMv2_2377_1 | HRGMv2_2377_1_83 | 76389 | 77399 | - | Cytidylate_kin2 |
| TC | HRGMv2_2377_1 | HRGMv2_2377_1_84 | 77413 | 78759 | - | 2.A.111.1.1 |
Gene ID: HRGMv2_2377_1_81
Type: CAZyme
Location: 74994 - 75710 (-)
Type: CAZyme
Location: 74994 - 75710 (-)
Gene ID: HRGMv2_2377_1_82
Type: pfam
Location: 75785 - 76282 (-)
Type: pfam
Location: 75785 - 76282 (-)
Gene ID: HRGMv2_2377_1_83
Type: pfam
Location: 76389 - 77399 (-)
Type: pfam
Location: 76389 - 77399 (-)
Gene ID: HRGMv2_2377_1_84
Type: TC
Location: 77413 - 78759 (-)
Type: TC
Location: 77413 - 78759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900547255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.