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Cluster: HRGMv2_2371_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2371_7 HRGMv2_2371_7_33 40566 41390 + 3.A.1.104.1
TC HRGMv2_2371_7 HRGMv2_2371_7_34 41427 42701 + 3.A.1.103.6
pfam HRGMv2_2371_7 HRGMv2_2371_7_35 42715 43605 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_36 43602 46649 + GT2
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_37 46874 49009 + GT2
NULL(UNKNOWN) HRGMv2_2371_7 HRGMv2_2371_7_38 49048 49341 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_39 49341 51131 + GT2
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_40 51171 53147 + GT2 | GT2
Gene ID: HRGMv2_2371_7_33
Type: TC
Location: 40566 - 41390 (+)
Gene ID: HRGMv2_2371_7_34
Type: TC
Location: 41427 - 42701 (+)
Gene ID: HRGMv2_2371_7_35
Type: pfam
Location: 42715 - 43605 (+)
Gene ID: HRGMv2_2371_7_36
Type: CAZyme
Location: 43602 - 46649 (+)
Gene ID: HRGMv2_2371_7_37
Type: CAZyme
Location: 46874 - 49009 (+)
Gene ID: HRGMv2_2371_7_38
Type:
Location: 49048 - 49341 (+)
Gene ID: HRGMv2_2371_7_39
Type: CAZyme
Location: 49341 - 51131 (+)
Gene ID: HRGMv2_2371_7_40
Type: CAZyme
Location: 51171 - 53147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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