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Cluster: HRGMv2_2371_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2371_7 HRGMv2_2371_7_10 14818 16188 + 9.B.18.1.3
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_11 16185 16925 + GT2
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_12 16944 18035 + GT4
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_13 18048 19319 + GT4
TC HRGMv2_2371_7 HRGMv2_2371_7_14 19338 20114 + 3.A.1.103.4
TC HRGMv2_2371_7 HRGMv2_2371_7_15 20116 21435 + 3.A.1.103.4
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_16 21442 22797 + GT4
NULL(UNKNOWN) HRGMv2_2371_7 HRGMv2_2371_7_17 22794 23207 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_18 23208 26489 + GT4 | GT4
Gene ID: HRGMv2_2371_7_10
Type: TC
Location: 14818 - 16188 (+)
Gene ID: HRGMv2_2371_7_11
Type: CAZyme
Location: 16185 - 16925 (+)
Gene ID: HRGMv2_2371_7_12
Type: CAZyme
Location: 16944 - 18035 (+)
Gene ID: HRGMv2_2371_7_13
Type: CAZyme
Location: 18048 - 19319 (+)
Gene ID: HRGMv2_2371_7_14
Type: TC
Location: 19338 - 20114 (+)
Gene ID: HRGMv2_2371_7_15
Type: TC
Location: 20116 - 21435 (+)
Gene ID: HRGMv2_2371_7_16
Type: CAZyme
Location: 21442 - 22797 (+)
Gene ID: HRGMv2_2371_7_17
Type:
Location: 22794 - 23207 (+)
Gene ID: HRGMv2_2371_7_18
Type: CAZyme
Location: 23208 - 26489 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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