Cluster: HRGMv2_2371_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2371
- CGC Family ID: CGCFAM_01624
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2371_2 | HRGMv2_2371_2_115 | 122103 | 123857 | + | 3.A.1.135.5 |
| TC | HRGMv2_2371_2 | HRGMv2_2371_2_116 | 123857 | 125785 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2371_2 | HRGMv2_2371_2_117 | 125936 | 126961 | + | Aminotran_4 |
| CAZyme | HRGMv2_2371_2 | HRGMv2_2371_2_118 | 127085 | 129208 | + | GH13_11 |
Gene ID: HRGMv2_2371_2_115
Type: TC
Location: 122103 - 123857 (+)
Type: TC
Location: 122103 - 123857 (+)
Gene ID: HRGMv2_2371_2_116
Type: TC
Location: 123857 - 125785 (+)
Type: TC
Location: 123857 - 125785 (+)
Gene ID: HRGMv2_2371_2_117
Type: pfam
Location: 125936 - 126961 (+)
Type: pfam
Location: 125936 - 126961 (+)
Gene ID: HRGMv2_2371_2_118
Type: CAZyme
Location: 127085 - 129208 (+)
Type: CAZyme
Location: 127085 - 129208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGTTR01
Species
JAGTTR01 sp018223385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.