dbCAN HGM

Cluster: HRGMv2_2371_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2371_2	HRGMv2_2371_2_34	35413	37287	+	3.A.1.120.6
CAZyme	HRGMv2_2371_2	HRGMv2_2371_2_35	37292	39331	+	GH13_11
pfam	HRGMv2_2371_2	HRGMv2_2371_2_36	39318	40046	+	TraX
pfam	HRGMv2_2371_2	HRGMv2_2371_2_37	40050	40607	+	DUF5662
TC	HRGMv2_2371_2	HRGMv2_2371_2_38	40817	42007	+	3.A.1.4.10
TC	HRGMv2_2371_2	HRGMv2_2371_2_39	42167	43045	+	3.A.1.4.10
TC	HRGMv2_2371_2	HRGMv2_2371_2_40	43055	44008	+	3.A.1.4.8
TC	HRGMv2_2371_2	HRGMv2_2371_2_41	44011	44775	+	3.A.1.4.10
TC	HRGMv2_2371_2	HRGMv2_2371_2_42	44788	45498	+	3.A.1.4.10

Gene ID: HRGMv2_2371_2_34
Type: TC
Location: 35413 - 37287 (+)

Gene ID: HRGMv2_2371_2_35
Type: CAZyme
Location: 37292 - 39331 (+)

Gene ID: HRGMv2_2371_2_36
Type: pfam
Location: 39318 - 40046 (+)

Gene ID: HRGMv2_2371_2_37
Type: pfam
Location: 40050 - 40607 (+)

Gene ID: HRGMv2_2371_2_38
Type: TC
Location: 40817 - 42007 (+)

Gene ID: HRGMv2_2371_2_39
Type: TC
Location: 42167 - 43045 (+)

Gene ID: HRGMv2_2371_2_40
Type: TC
Location: 43055 - 44008 (+)

Gene ID: HRGMv2_2371_2_41
Type: TC
Location: 44011 - 44775 (+)

Gene ID: HRGMv2_2371_2_42
Type: TC
Location: 44788 - 45498 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2371_2_35	vegetarian > omnivore	1.16652	0.00694
HRGMv2_2371_2_37	vegetarian > omnivore	1.00027	0.00694
HRGMv2_2371_2_39	vegetarian > omnivore	1.32871	0.00694
HRGMv2_2371_2_40	vegetarian > omnivore	1.51865	0.00694