Cluster: HRGMv2_2371_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2371
- CGC Family ID: CGCFAM_00086
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2371_12 | HRGMv2_2371_12_33 | 31613 | 33418 | + | 3.A.16.1.2 |
| STP | HRGMv2_2371_12 | HRGMv2_2371_12_34 | 33500 | 33859 | - | Glyoxalase |
| CAZyme | HRGMv2_2371_12 | HRGMv2_2371_12_35 | 34321 | 36663 | - | GH13_39 |
| TC | HRGMv2_2371_12 | HRGMv2_2371_12_36 | 36940 | 38769 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2371_12_33
Type: TC
Location: 31613 - 33418 (+)
Type: TC
Location: 31613 - 33418 (+)
Gene ID: HRGMv2_2371_12_34
Type: STP
Location: 33500 - 33859 (-)
Type: STP
Location: 33500 - 33859 (-)
Gene ID: HRGMv2_2371_12_35
Type: CAZyme
Location: 34321 - 36663 (-)
Type: CAZyme
Location: 34321 - 36663 (-)
Gene ID: HRGMv2_2371_12_36
Type: TC
Location: 36940 - 38769 (-)
Type: TC
Location: 36940 - 38769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGTTR01
Species
JAGTTR01 sp018223385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2371_12_34 | vegetarian > omnivore | 1.13839 | 0.00694 |
| HRGMv2_2371_12_34 | vegetarian > vegan | 1.21178 | 0.00442 |