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Cluster: HRGMv2_2371_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_45 56666 58405 + GT2
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_46 58456 59418 + GT2
TC HRGMv2_2371_7 HRGMv2_2371_7_47 59669 61069 + 9.B.18.1.1
pfam HRGMv2_2371_7 HRGMv2_2371_7_48 61104 62366 + LytR_cpsA_psr
pfam HRGMv2_2371_7 HRGMv2_2371_7_49 62560 63444 + SASA
CAZyme HRGMv2_2371_7 HRGMv2_2371_7_50 63441 64361 + GT2
Gene ID: HRGMv2_2371_7_45
Type: CAZyme
Location: 56666 - 58405 (+)
Gene ID: HRGMv2_2371_7_46
Type: CAZyme
Location: 58456 - 59418 (+)
Gene ID: HRGMv2_2371_7_47
Type: TC
Location: 59669 - 61069 (+)
Gene ID: HRGMv2_2371_7_48
Type: pfam
Location: 61104 - 62366 (+)
Gene ID: HRGMv2_2371_7_49
Type: pfam
Location: 62560 - 63444 (+)
Gene ID: HRGMv2_2371_7_50
Type: CAZyme
Location: 63441 - 64361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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