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Cluster: HRGMv2_2371_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2371_1 HRGMv2_2371_1_39 41831 43516 + GH13_31
pfam HRGMv2_2371_1 HRGMv2_2371_1_40 43680 46046 + Sulfatase
TC HRGMv2_2371_1 HRGMv2_2371_1_41 46043 47569 + 2.A.21.9.2
TF HRGMv2_2371_1 HRGMv2_2371_1_42 47541 48236 + Trans_reg_C
pfam HRGMv2_2371_1 HRGMv2_2371_1_43 48250 49626 + Aldedh | LuxC
TC HRGMv2_2371_1 HRGMv2_2371_1_44 49788 50363 + 2.A.107.1.2
pfam HRGMv2_2371_1 HRGMv2_2371_1_45 50395 51792 + Radical_SAM | SPASM
STP HRGMv2_2371_1 HRGMv2_2371_1_46 51918 52487 + TetR_N
TC HRGMv2_2371_1 HRGMv2_2371_1_47 52794 53990 + 2.A.86.1.8
Gene ID: HRGMv2_2371_1_39
Type: CAZyme
Location: 41831 - 43516 (+)
Gene ID: HRGMv2_2371_1_40
Type: pfam
Location: 43680 - 46046 (+)
Gene ID: HRGMv2_2371_1_41
Type: TC
Location: 46043 - 47569 (+)
Gene ID: HRGMv2_2371_1_42
Type: TF
Location: 47541 - 48236 (+)
Gene ID: HRGMv2_2371_1_43
Type: pfam
Location: 48250 - 49626 (+)
Gene ID: HRGMv2_2371_1_44
Type: TC
Location: 49788 - 50363 (+)
Gene ID: HRGMv2_2371_1_45
Type: pfam
Location: 50395 - 51792 (+)
Gene ID: HRGMv2_2371_1_46
Type: STP
Location: 51918 - 52487 (+)
Gene ID: HRGMv2_2371_1_47
Type: TC
Location: 52794 - 53990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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