Cluster: HRGMv2_2344_CGC9
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_135 | 161361 | 163943 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2344_2 | HRGMv2_2344_2_136 | 164129 | 165124 | - | DnaJ | DnaJ_C |
| pfam | HRGMv2_2344_2 | HRGMv2_2344_2_137 | 165215 | 165652 | - | HSP20 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_138 | 165855 | 168116 | - | 2.A.21.9.2 |
| NULL(UNKNOWN) | HRGMv2_2344_2 | HRGMv2_2344_2_139 | 168444 | 168611 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_140 | 168719 | 169657 | + | 3.A.1.105.1 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_141 | 169662 | 170573 | + | 3.A.1.130.1 |
| TF | HRGMv2_2344_2 | HRGMv2_2344_2_142 | 170598 | 171035 | + | LytTR |
| pfam | HRGMv2_2344_2 | HRGMv2_2344_2_143 | 171063 | 171515 | + | DUF3021 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_144 | 171685 | 172260 | + | 3.A.1.25.5 |
| CAZyme | HRGMv2_2344_2 | HRGMv2_2344_2_145 | 172410 | 175247 | - | GH2 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_146 | 175385 | 176836 | - | 2.A.21.2.4 |
| STP | HRGMv2_2344_2 | HRGMv2_2344_2_147 | 176952 | 179915 | - | HATPase_c | HisKA | Response_reg | Response_reg | SBP_bac_3 |
| pfam | HRGMv2_2344_2 | HRGMv2_2344_2_148 | 179942 | 180289 | - | Hpt |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_149 | 180295 | 181395 | - | 8.A.59.4.1 |
| CAZyme | HRGMv2_2344_2 | HRGMv2_2344_2_150 | 181585 | 182691 | - | GT28 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_151 | 182694 | 183311 | - | 9.B.31.1.1 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_152 | 183347 | 185221 | - | 3.A.1.135.5 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_153 | 185248 | 186999 | - | 3.A.1.135.5 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_154 | 187185 | 188354 | - | 3.A.1.2.5 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_155 | 188367 | 189536 | - | 3.A.1.2.5 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_156 | 189539 | 191056 | - | 3.A.1.2.5 |
| NULL(UNKNOWN) | HRGMv2_2344_2 | HRGMv2_2344_2_157 | 191053 | 191193 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_158 | 191222 | 192382 | - | 3.A.1.2.5 |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_159 | 192624 | 193682 | - | 3.A.1.2.26 |
| TF | HRGMv2_2344_2 | HRGMv2_2344_2_160 | 193679 | 195295 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_161 | 195288 | 196754 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2344_2_135
Type: TC
Location: 161361 - 163943 (-)
Type: TC
Location: 161361 - 163943 (-)
Gene ID: HRGMv2_2344_2_136
Type: pfam
Location: 164129 - 165124 (-)
Type: pfam
Location: 164129 - 165124 (-)
Gene ID: HRGMv2_2344_2_137
Type: pfam
Location: 165215 - 165652 (-)
Type: pfam
Location: 165215 - 165652 (-)
Gene ID: HRGMv2_2344_2_138
Type: TC
Location: 165855 - 168116 (-)
Type: TC
Location: 165855 - 168116 (-)
Gene ID: HRGMv2_2344_2_139
Type:
Location: 168444 - 168611 (-)
Type:
Location: 168444 - 168611 (-)
Gene ID: HRGMv2_2344_2_140
Type: TC
Location: 168719 - 169657 (+)
Type: TC
Location: 168719 - 169657 (+)
Gene ID: HRGMv2_2344_2_141
Type: TC
Location: 169662 - 170573 (+)
Type: TC
Location: 169662 - 170573 (+)
Gene ID: HRGMv2_2344_2_142
Type: TF
Location: 170598 - 171035 (+)
Type: TF
Location: 170598 - 171035 (+)
Gene ID: HRGMv2_2344_2_143
Type: pfam
Location: 171063 - 171515 (+)
Type: pfam
Location: 171063 - 171515 (+)
Gene ID: HRGMv2_2344_2_144
Type: TC
Location: 171685 - 172260 (+)
Type: TC
Location: 171685 - 172260 (+)
Gene ID: HRGMv2_2344_2_145
Type: CAZyme
Location: 172410 - 175247 (-)
Type: CAZyme
Location: 172410 - 175247 (-)
Gene ID: HRGMv2_2344_2_146
Type: TC
Location: 175385 - 176836 (-)
Type: TC
Location: 175385 - 176836 (-)
Gene ID: HRGMv2_2344_2_147
Type: STP
Location: 176952 - 179915 (-)
Type: STP
Location: 176952 - 179915 (-)
Gene ID: HRGMv2_2344_2_148
Type: pfam
Location: 179942 - 180289 (-)
Type: pfam
Location: 179942 - 180289 (-)
Gene ID: HRGMv2_2344_2_149
Type: TC
Location: 180295 - 181395 (-)
Type: TC
Location: 180295 - 181395 (-)
Gene ID: HRGMv2_2344_2_150
Type: CAZyme
Location: 181585 - 182691 (-)
Type: CAZyme
Location: 181585 - 182691 (-)
Gene ID: HRGMv2_2344_2_151
Type: TC
Location: 182694 - 183311 (-)
Type: TC
Location: 182694 - 183311 (-)
Gene ID: HRGMv2_2344_2_152
Type: TC
Location: 183347 - 185221 (-)
Type: TC
Location: 183347 - 185221 (-)
Gene ID: HRGMv2_2344_2_153
Type: TC
Location: 185248 - 186999 (-)
Type: TC
Location: 185248 - 186999 (-)
Gene ID: HRGMv2_2344_2_154
Type: TC
Location: 187185 - 188354 (-)
Type: TC
Location: 187185 - 188354 (-)
Gene ID: HRGMv2_2344_2_155
Type: TC
Location: 188367 - 189536 (-)
Type: TC
Location: 188367 - 189536 (-)
Gene ID: HRGMv2_2344_2_156
Type: TC
Location: 189539 - 191056 (-)
Type: TC
Location: 189539 - 191056 (-)
Gene ID: HRGMv2_2344_2_157
Type:
Location: 191053 - 191193 (-)
Type:
Location: 191053 - 191193 (-)
Gene ID: HRGMv2_2344_2_158
Type: TC
Location: 191222 - 192382 (-)
Type: TC
Location: 191222 - 192382 (-)
Gene ID: HRGMv2_2344_2_159
Type: TC
Location: 192624 - 193682 (-)
Type: TC
Location: 192624 - 193682 (-)
Gene ID: HRGMv2_2344_2_160
Type: TF
Location: 193679 - 195295 (-)
Type: TF
Location: 193679 - 195295 (-)
Gene ID: HRGMv2_2344_2_161
Type: TC
Location: 195288 - 196754 (-)
Type: TC
Location: 195288 - 196754 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.