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Cluster: HRGMv2_2344_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2344_21 HRGMv2_2344_21_19 16622 17272 + 9.B.156.3.1
pfam HRGMv2_2344_21 HRGMv2_2344_21_20 17463 18836 + FAD-depend_C
pfam HRGMv2_2344_21 HRGMv2_2344_21_21 18900 19433 + Gate
CAZyme HRGMv2_2344_21 HRGMv2_2344_21_22 19917 21224 + GH27
pfam HRGMv2_2344_21 HRGMv2_2344_21_23 21282 21743 + Mrr_cat | Mrr_cat_2
pfam HRGMv2_2344_21 HRGMv2_2344_21_24 21689 23533 - DUF885
TC HRGMv2_2344_21 HRGMv2_2344_21_25 23595 24662 - 9.B.34.1.2
TC HRGMv2_2344_21 HRGMv2_2344_21_26 24809 26254 + 8.A.59.2.1
TC HRGMv2_2344_21 HRGMv2_2344_21_27 26277 27323 + 3.A.1.2.14
TF HRGMv2_2344_21 HRGMv2_2344_21_28 27343 28974 + HTH_AraC | HTH_AraC
TF HRGMv2_2344_21 HRGMv2_2344_21_29 28976 30064 - GntR
TC HRGMv2_2344_21 HRGMv2_2344_21_30 30525 31658 + 3.A.1.2.14
TC HRGMv2_2344_21 HRGMv2_2344_21_31 31794 33320 + 3.A.1.2.25
TC HRGMv2_2344_21 HRGMv2_2344_21_32 33313 34383 + 3.A.1.2.25
TC HRGMv2_2344_21 HRGMv2_2344_21_33 34387 35415 + 3.A.1.2.25
TC HRGMv2_2344_21 HRGMv2_2344_21_34 35505 37223 + 1.B.52.2.2
Gene ID: HRGMv2_2344_21_19
Type: TC
Location: 16622 - 17272 (+)
Gene ID: HRGMv2_2344_21_20
Type: pfam
Location: 17463 - 18836 (+)
Gene ID: HRGMv2_2344_21_21
Type: pfam
Location: 18900 - 19433 (+)
Gene ID: HRGMv2_2344_21_22
Type: CAZyme
Location: 19917 - 21224 (+)
Gene ID: HRGMv2_2344_21_23
Type: pfam
Location: 21282 - 21743 (+)
Gene ID: HRGMv2_2344_21_24
Type: pfam
Location: 21689 - 23533 (-)
Gene ID: HRGMv2_2344_21_25
Type: TC
Location: 23595 - 24662 (-)
Gene ID: HRGMv2_2344_21_26
Type: TC
Location: 24809 - 26254 (+)
Gene ID: HRGMv2_2344_21_27
Type: TC
Location: 26277 - 27323 (+)
Gene ID: HRGMv2_2344_21_28
Type: TF
Location: 27343 - 28974 (+)
Gene ID: HRGMv2_2344_21_29
Type: TF
Location: 28976 - 30064 (-)
Gene ID: HRGMv2_2344_21_30
Type: TC
Location: 30525 - 31658 (+)
Gene ID: HRGMv2_2344_21_31
Type: TC
Location: 31794 - 33320 (+)
Gene ID: HRGMv2_2344_21_32
Type: TC
Location: 33313 - 34383 (+)
Gene ID: HRGMv2_2344_21_33
Type: TC
Location: 34387 - 35415 (+)
Gene ID: HRGMv2_2344_21_34
Type: TC
Location: 35505 - 37223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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