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Cluster: HRGMv2_2344_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_17 HRGMv2_2344_17_27 31677 38666 - CBM4 | CBM4 | GH16_3
CAZyme HRGMv2_2344_17 HRGMv2_2344_17_28 38883 40532 - GH13_31
TC HRGMv2_2344_17 HRGMv2_2344_17_29 40552 41394 - 3.A.1.1.28
TC HRGMv2_2344_17 HRGMv2_2344_17_30 41394 42269 - 3.A.1.1.28
TC HRGMv2_2344_17 HRGMv2_2344_17_31 42350 43660 - 3.A.1.1.28
TF HRGMv2_2344_17 HRGMv2_2344_17_32 43844 44869 - LacI
TF HRGMv2_2344_17 HRGMv2_2344_17_33 45351 45737 + 0035318
TC HRGMv2_2344_17 HRGMv2_2344_17_34 45750 47102 - 2.A.66.1.32
Gene ID: HRGMv2_2344_17_27
Type: CAZyme
Location: 31677 - 38666 (-)
Gene ID: HRGMv2_2344_17_28
Type: CAZyme
Location: 38883 - 40532 (-)
Gene ID: HRGMv2_2344_17_29
Type: TC
Location: 40552 - 41394 (-)
Gene ID: HRGMv2_2344_17_30
Type: TC
Location: 41394 - 42269 (-)
Gene ID: HRGMv2_2344_17_31
Type: TC
Location: 42350 - 43660 (-)
Gene ID: HRGMv2_2344_17_32
Type: TF
Location: 43844 - 44869 (-)
Gene ID: HRGMv2_2344_17_33
Type: TF
Location: 45351 - 45737 (+)
Gene ID: HRGMv2_2344_17_34
Type: TC
Location: 45750 - 47102 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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