Cluster: HRGMv2_2344_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_12 | HRGMv2_2344_12_67 | 72777 | 74465 | + | GH3 |
| CAZyme | HRGMv2_2344_12 | HRGMv2_2344_12_68 | 74491 | 75975 | + | GH78 |
| TC | HRGMv2_2344_12 | HRGMv2_2344_12_69 | 75993 | 77726 | + | 1.B.52.2.2 |
Gene ID: HRGMv2_2344_12_67
Type: CAZyme
Location: 72777 - 74465 (+)
Type: CAZyme
Location: 72777 - 74465 (+)
Gene ID: HRGMv2_2344_12_68
Type: CAZyme
Location: 74491 - 75975 (+)
Type: CAZyme
Location: 74491 - 75975 (+)
Gene ID: HRGMv2_2344_12_69
Type: TC
Location: 75993 - 77726 (+)
Type: TC
Location: 75993 - 77726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2344_12_67 | vegan > omnivore | 2.94547 | 0.00933 |