Cluster: HRGMv2_2344_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_7 | HRGMv2_2344_7_11 | 6525 | 8864 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_2344_7 | HRGMv2_2344_7_12 | 9142 | 9270 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2344_7 | HRGMv2_2344_7_13 | 9267 | 9437 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2344_7 | HRGMv2_2344_7_14 | 9434 | 11350 | + | GH2 |
| pfam | HRGMv2_2344_7 | HRGMv2_2344_7_15 | 11325 | 12266 | + | Bgal_small_N |
| pfam | HRGMv2_2344_7 | HRGMv2_2344_7_16 | 12494 | 19036 | + | Big_2 | Flg_new | Fn3_assoc | Fn3_assoc | CHB_HEX_C_1 | CHB_HEX_C_1 |
| CAZyme | HRGMv2_2344_7 | HRGMv2_2344_7_17 | 19383 | 20318 | + | GH26 |
Gene ID: HRGMv2_2344_7_11
Type: TC
Location: 6525 - 8864 (+)
Type: TC
Location: 6525 - 8864 (+)
Gene ID: HRGMv2_2344_7_12
Type:
Location: 9142 - 9270 (+)
Type:
Location: 9142 - 9270 (+)
Gene ID: HRGMv2_2344_7_13
Type:
Location: 9267 - 9437 (+)
Type:
Location: 9267 - 9437 (+)
Gene ID: HRGMv2_2344_7_14
Type: CAZyme
Location: 9434 - 11350 (+)
Type: CAZyme
Location: 9434 - 11350 (+)
Gene ID: HRGMv2_2344_7_15
Type: pfam
Location: 11325 - 12266 (+)
Type: pfam
Location: 11325 - 12266 (+)
Gene ID: HRGMv2_2344_7_16
Type: pfam
Location: 12494 - 19036 (+)
Type: pfam
Location: 12494 - 19036 (+)
Gene ID: HRGMv2_2344_7_17
Type: CAZyme
Location: 19383 - 20318 (+)
Type: CAZyme
Location: 19383 - 20318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.