Cluster: HRGMv2_2344_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_6 | HRGMv2_2344_6_63 | 52107 | 54011 | + | GH2 |
| TF | HRGMv2_2344_6 | HRGMv2_2344_6_64 | 54330 | 54773 | + | LytTR |
| NULL(UNKNOWN) | HRGMv2_2344_6 | HRGMv2_2344_6_65 | 54773 | 55258 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_6 | HRGMv2_2344_6_66 | 55245 | 56066 | + | 3.A.1.105.7 |
Gene ID: HRGMv2_2344_6_63
Type: CAZyme
Location: 52107 - 54011 (+)
Type: CAZyme
Location: 52107 - 54011 (+)
Gene ID: HRGMv2_2344_6_64
Type: TF
Location: 54330 - 54773 (+)
Type: TF
Location: 54330 - 54773 (+)
Gene ID: HRGMv2_2344_6_65
Type:
Location: 54773 - 55258 (+)
Type:
Location: 54773 - 55258 (+)
Gene ID: HRGMv2_2344_6_66
Type: TC
Location: 55245 - 56066 (+)
Type: TC
Location: 55245 - 56066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.