Cluster: HRGMv2_2344_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_5 | HRGMv2_2344_5_71 | 62803 | 64257 | - | 2.A.38.1.1 |
| STP | HRGMv2_2344_5 | HRGMv2_2344_5_72 | 64269 | 65627 | - | TrkA_C | TrkA_C |
| pfam | HRGMv2_2344_5 | HRGMv2_2344_5_73 | 65710 | 66606 | - | ROK |
| TC | HRGMv2_2344_5 | HRGMv2_2344_5_74 | 66754 | 68535 | - | 3.A.1.106.3 |
| TC | HRGMv2_2344_5 | HRGMv2_2344_5_75 | 68516 | 70306 | - | 3.A.1.106.3 |
| NULL(UNKNOWN) | HRGMv2_2344_5 | HRGMv2_2344_5_76 | 70480 | 70581 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2344_5 | HRGMv2_2344_5_77 | 70818 | 72128 | - | GH13_20 |
Gene ID: HRGMv2_2344_5_71
Type: TC
Location: 62803 - 64257 (-)
Type: TC
Location: 62803 - 64257 (-)
Gene ID: HRGMv2_2344_5_72
Type: STP
Location: 64269 - 65627 (-)
Type: STP
Location: 64269 - 65627 (-)
Gene ID: HRGMv2_2344_5_73
Type: pfam
Location: 65710 - 66606 (-)
Type: pfam
Location: 65710 - 66606 (-)
Gene ID: HRGMv2_2344_5_74
Type: TC
Location: 66754 - 68535 (-)
Type: TC
Location: 66754 - 68535 (-)
Gene ID: HRGMv2_2344_5_75
Type: TC
Location: 68516 - 70306 (-)
Type: TC
Location: 68516 - 70306 (-)
Gene ID: HRGMv2_2344_5_76
Type:
Location: 70480 - 70581 (-)
Type:
Location: 70480 - 70581 (-)
Gene ID: HRGMv2_2344_5_77
Type: CAZyme
Location: 70818 - 72128 (-)
Type: CAZyme
Location: 70818 - 72128 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.