Cluster: HRGMv2_2344_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_4 | HRGMv2_2344_4_56 | 72454 | 73617 | + | GT4 |
| CAZyme | HRGMv2_2344_4 | HRGMv2_2344_4_57 | 73614 | 74729 | + | GT4 |
| pfam | HRGMv2_2344_4 | HRGMv2_2344_4_58 | 74732 | 76381 | + | DUF6020 |
| TC | HRGMv2_2344_4 | HRGMv2_2344_4_59 | 76383 | 77891 | + | 2.A.50.2.1 |
Gene ID: HRGMv2_2344_4_56
Type: CAZyme
Location: 72454 - 73617 (+)
Type: CAZyme
Location: 72454 - 73617 (+)
Gene ID: HRGMv2_2344_4_57
Type: CAZyme
Location: 73614 - 74729 (+)
Type: CAZyme
Location: 73614 - 74729 (+)
Gene ID: HRGMv2_2344_4_58
Type: pfam
Location: 74732 - 76381 (+)
Type: pfam
Location: 74732 - 76381 (+)
Gene ID: HRGMv2_2344_4_59
Type: TC
Location: 76383 - 77891 (+)
Type: TC
Location: 76383 - 77891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.