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Cluster: HRGMv2_2344_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_43 55641 56588 + GT2
pfam HRGMv2_2344_4 HRGMv2_2344_4_44 56563 58419 + DUF6020
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_45 58482 60956 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2344_4 HRGMv2_2344_4_46 60967 62844 + 9.B.18.2.1
STP HRGMv2_2344_4 HRGMv2_2344_4_47 62862 63995 + Aminotran_1_2
TC HRGMv2_2344_4 HRGMv2_2344_4_48 64032 64673 + 9.B.18.1.2
pfam HRGMv2_2344_4 HRGMv2_2344_4_49 64663 65658 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_50 65682 66761 + GT4
Gene ID: HRGMv2_2344_4_43
Type: CAZyme
Location: 55641 - 56588 (+)
Gene ID: HRGMv2_2344_4_44
Type: pfam
Location: 56563 - 58419 (+)
Gene ID: HRGMv2_2344_4_45
Type:
Location: 58482 - 60956 (+)
Gene ID: HRGMv2_2344_4_46
Type: TC
Location: 60967 - 62844 (+)
Gene ID: HRGMv2_2344_4_47
Type: STP
Location: 62862 - 63995 (+)
Gene ID: HRGMv2_2344_4_48
Type: TC
Location: 64032 - 64673 (+)
Gene ID: HRGMv2_2344_4_49
Type: pfam
Location: 64663 - 65658 (+)
Gene ID: HRGMv2_2344_4_50
Type: CAZyme
Location: 65682 - 66761 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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