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Cluster: HRGMv2_2344_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_21 28494 29303 + GT2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_22 29337 30635 + GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_23 30632 31816 + GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_24 31824 32828 + GT2
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_25 32825 34447 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2344_4 HRGMv2_2344_4_26 34584 35579 + 9.B.18.2.1
STP HRGMv2_2344_4 HRGMv2_2344_4_27 35618 36811 + Aminotran_1_2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_28 36853 37884 + GT2
Gene ID: HRGMv2_2344_4_21
Type: CAZyme
Location: 28494 - 29303 (+)
Gene ID: HRGMv2_2344_4_22
Type: CAZyme
Location: 29337 - 30635 (+)
Gene ID: HRGMv2_2344_4_23
Type: CAZyme
Location: 30632 - 31816 (+)
Gene ID: HRGMv2_2344_4_24
Type: CAZyme
Location: 31824 - 32828 (+)
Gene ID: HRGMv2_2344_4_25
Type:
Location: 32825 - 34447 (+)
Gene ID: HRGMv2_2344_4_26
Type: TC
Location: 34584 - 35579 (+)
Gene ID: HRGMv2_2344_4_27
Type: STP
Location: 35618 - 36811 (+)
Gene ID: HRGMv2_2344_4_28
Type: CAZyme
Location: 36853 - 37884 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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