Cluster: HRGMv2_2344_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_3 | HRGMv2_2344_3_125 | 136940 | 138859 | - | GT2 |
| pfam | HRGMv2_2344_3 | HRGMv2_2344_3_126 | 138859 | 140436 | - | Lipase_GDSL | Polysacc_deac_1 | Lipase_GDSL_2 |
| pfam | HRGMv2_2344_3 | HRGMv2_2344_3_127 | 140806 | 141066 | - | Ribosomal_S18 |
| TC | HRGMv2_2344_3 | HRGMv2_2344_3_128 | 141114 | 141554 | - | 3.A.7.19.1 |
Gene ID: HRGMv2_2344_3_125
Type: CAZyme
Location: 136940 - 138859 (-)
Type: CAZyme
Location: 136940 - 138859 (-)
Gene ID: HRGMv2_2344_3_126
Type: pfam
Location: 138859 - 140436 (-)
Type: pfam
Location: 138859 - 140436 (-)
Gene ID: HRGMv2_2344_3_127
Type: pfam
Location: 140806 - 141066 (-)
Type: pfam
Location: 140806 - 141066 (-)
Gene ID: HRGMv2_2344_3_128
Type: TC
Location: 141114 - 141554 (-)
Type: TC
Location: 141114 - 141554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.