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Cluster: HRGMv2_2337_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2337_6 HRGMv2_2337_6_2 1207 2838 - 3.A.18.1.1
TC HRGMv2_2337_6 HRGMv2_2337_6_3 2962 3615 + 1.C.113.1.3
STP HRGMv2_2337_6 HRGMv2_2337_6_4 3673 4449 - Peptidase_M23
NULL(UNKNOWN) HRGMv2_2337_6 HRGMv2_2337_6_5 4480 5283 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2337_6 HRGMv2_2337_6_6 5404 7872 - GT35
pfam HRGMv2_2337_6 HRGMv2_2337_6_7 7890 11045 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
pfam HRGMv2_2337_6 HRGMv2_2337_6_8 11430 12287 - Aminotran_4
TC HRGMv2_2337_6 HRGMv2_2337_6_9 12284 13462 - 2.A.120.1.5
Gene ID: HRGMv2_2337_6_2
Type: TC
Location: 1207 - 2838 (-)
Gene ID: HRGMv2_2337_6_3
Type: TC
Location: 2962 - 3615 (+)
Gene ID: HRGMv2_2337_6_4
Type: STP
Location: 3673 - 4449 (-)
Gene ID: HRGMv2_2337_6_5
Type:
Location: 4480 - 5283 (-)
Gene ID: HRGMv2_2337_6_6
Type: CAZyme
Location: 5404 - 7872 (-)
Gene ID: HRGMv2_2337_6_7
Type: pfam
Location: 7890 - 11045 (-)
Gene ID: HRGMv2_2337_6_8
Type: pfam
Location: 11430 - 12287 (-)
Gene ID: HRGMv2_2337_6_9
Type: TC
Location: 12284 - 13462 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Hominiventricola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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