PROTEIN: HRGMv2_2337_6_5
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Protein File & Metadata
Source:
HRGMv2_2337_6_5.pdb
Genome ID:
Protein ID:
HRGMv2_2337_6_5
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Protein Sequence
MKNILAVCFM ILFLPYLITL VTSGRQGIGR EEKLPEQEYA VLETMLSEDL SWMDAQTLRL 60 MSVLKRTEIV RQQQTGLAIV QEPSTELYGD LYSRVYQAVQ ETEGQVVTIG GEFRELPYHG 120 ISSGRTRDGS LLGDEYSYIK AVDCPMDPEA EEYLQFFYME SVDFWKCLGQ SEVEMLPVLE 180 RDEAGYVNRM LFGDTVLQGE KARELLHLPS SCFFLEEDGG RIRITVKGSG HGFGVSLYTA 240 GRMMTEGADM TEVFQQFYED AECITLP 267
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975LLJ1 | CBM50 | 2 | 266 | 153 | 563 | 0.5991 |
0.8269 |
| A0A975LGA7 | CBM50 | 26 | 266 | 297 | 568 | 0.5779 |
0.872 |
| C9MMY7 | GT2 | 1 | 267 | 14 | 1243 | 0.492 |
0.821 |
| AF-A0A6M6E844-F1-model_v4 | CBM50 | 12 | 267 | 69 | 461 | 0.4814 |
0.7703 |
| A0A6N3FW23 | GT2 | 3 | 267 | 72 | 1295 | 0.4785 |
0.8098 |
| AF-A0A7D4G7S7-F1-model_v4 | GT2 | 2 | 267 | 16 | 1248 | 0.4666 |
0.7812 |
| AF-A0A250KHW7-F1-model_v4 | GT2 | 2 | 267 | 43 | 1248 | 0.4638 |
0.7761 |
| AF-A0A0K1NIT7-F1-model_v4 | GT2 | 2 | 267 | 16 | 1248 | 0.4615 |
0.7723 |
| AF-A0A5P8E416-F1-model_v4 | GT2 | 4 | 267 | 259 | 1262 | 0.4613 |
0.779 |
| UKK47266.1 | GT2 | 14 | 267 | 158 | 1267 | 0.4612 |
0.807 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975LLJ1 | CBM50 | 2 | 266 | 153 | 563 | 0.5991 |
0.8269 |
| A0A975LGA7 | CBM50 | 26 | 266 | 297 | 568 | 0.5779 |
0.872 |
| C9MMY7 | GT2 | 1 | 267 | 14 | 1243 | 0.492 |
0.821 |
| A0A6M6E844 | CBM50 | 12 | 267 | 69 | 461 | 0.4814 |
0.7703 |
| A0A6N3FW23 | GT2 | 3 | 267 | 72 | 1295 | 0.4785 |
0.8098 |
| UKK47266.1 | GT2 | 14 | 267 | 158 | 1267 | 0.4612 |
0.807 |
| A0A2N6QR17 | GT2 | 12 | 267 | 844 | 1263 | 0.4585 |
0.7953 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4rwr-assembly2.cif.gz_B | 32 | 267 | 8 | 264 | 0.7587 |
0.8757 |
| 4rwr-assembly1.cif.gz_A | 32 | 267 | 8 | 265 | 0.7561 |
0.8721 |
| 5txu-assembly1.cif.gz_A | 35 | 267 | 19 | 285 | 0.754 |
0.9044 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P07372-F1-model_v4 | 32 | 267 | 55 | 333 | 0.6864 |
0.8812 |
| AF-P13251-F1-model_v4 | 32 | 267 | 56 | 334 | 0.6826 |
0.8777 |
| AF-C0QYX7-F1-model_v4 | 14 | 267 | 46 | 355 | 0.6563 |
0.81 |
| AF-Q02113-F1-model_v4 | 1 | 266 | 276 | 705 | 0.5365 |
0.7886 |