Cluster: HRGMv2_2335_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- CGC Family ID: CGCFAM_00047
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2335_18 | HRGMv2_2335_18_5 | 11397 | 12503 | + | 2.A.36.2.1 |
| CAZyme | HRGMv2_2335_18 | HRGMv2_2335_18_6 | 12601 | 15036 | - | GH94 |
| TF | HRGMv2_2335_18 | HRGMv2_2335_18_7 | 15528 | 16550 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2335_18 | HRGMv2_2335_18_8 | 16648 | 18072 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2335_18 | HRGMv2_2335_18_9 | 18328 | 19236 | + | 3.A.1.1.4 |
| TC | HRGMv2_2335_18 | HRGMv2_2335_18_10 | 19252 | 20118 | + | 3.A.1.1.47 |
Gene ID: HRGMv2_2335_18_5
Type: TC
Location: 11397 - 12503 (+)
Type: TC
Location: 11397 - 12503 (+)
Gene ID: HRGMv2_2335_18_6
Type: CAZyme
Location: 12601 - 15036 (-)
Type: CAZyme
Location: 12601 - 15036 (-)
Gene ID: HRGMv2_2335_18_7
Type: TF
Location: 15528 - 16550 (+)
Type: TF
Location: 15528 - 16550 (+)
Gene ID: HRGMv2_2335_18_8
Type:
Location: 16648 - 18072 (+)
Type:
Location: 16648 - 18072 (+)
Gene ID: HRGMv2_2335_18_9
Type: TC
Location: 18328 - 19236 (+)
Type: TC
Location: 18328 - 19236 (+)
Gene ID: HRGMv2_2335_18_10
Type: TC
Location: 19252 - 20118 (+)
Type: TC
Location: 19252 - 20118 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.