PROTEIN: HRGMv2_2335_18_8
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Protein File & Metadata
Source:
HRGMv2_2335_18_8.pdb
Genome ID:
Protein ID:
HRGMv2_2335_18_8
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Protein Sequence
MKKKVLSALL TTAMLASMLV GCGNSNDAPA AASTDAAPAA STEAAPAAST EAAPAASTEA 60 AAEEGKILNI YCWNEEFKSR LTDHYPGYEE VDGTTGKIGD VTVKWNITPN DDNAYQNNLD 120 ATLLKQADAA ADDKIDLFLV EADYALKYVD TDYTMAVKDL GITDADLANQ YQYTKDIVTD 180 SKGTLKGVSW QGCPGVLIYS RDVAKEVLGS DDPAEVQKAV ADWDTFTATA ETMKKAGYYM 240 TATVNDTYRV YSNNVSGKWV QDGKIVVDDN LMKWVEDSKK MVDAKETNTY ELWSDDWSKG 300 FYPDGKVFCY FGPAWFVDFS MAADVDGSIA NAGKWGATEG PQGFFWGGTW ICAAQGTDNA 360 SLVKDIMLKM TTDTDIMTEI VKQDNDFVNN KPAMEAMAAD TSYSSKVLGG QNPLAMYCAG 420 AEKIDLSNLS AYDQGCNEEF QNAMKNYFDG KTDLDGALDL FYKAVVEKYP ELTH 474
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 65 | 474 | 62 | 499 | 0.5219 |
0.6357 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 472 | 231 | 866 | 0.558 |
0.7285 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 64 | 471 | 1 | 393 | 0.799 |
0.887 |
| 3uor-assembly2.cif.gz_B | 66 | 473 | 1 | 388 | 0.7491 |
0.8454 |
| 6x84-assembly2.cif.gz_B | 64 | 473 | 1 | 411 | 0.7367 |
0.809 |
| 4rk2-assembly1.cif.gz_A | 64 | 470 | 1 | 393 | 0.7336 |
0.8181 |
| 8bfy-assembly1.cif.gz_A | 66 | 471 | 1 | 393 | 0.7292 |
0.8156 |
| 7bvt-assembly1.cif.gz_A | 63 | 472 | 1 | 391 | 0.7284 |
0.8134 |
| 7vfq-assembly1.cif.gz_A | 65 | 474 | 1 | 394 | 0.7237 |
0.8077 |
| 7vfr-assembly1.cif.gz_A | 65 | 474 | 1 | 397 | 0.7231 |
0.8043 |
| 7vfq-assembly2.cif.gz_B | 65 | 474 | 1 | 396 | 0.7231 |
0.8052 |
| 4mfi-assembly1.cif.gz_A | 62 | 473 | 3 | 398 | 0.7226 |
0.8097 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 63 | 471 | 26 | 422 | 0.7425 |
0.8465 |
| AF-O31518-F1-model_v4 | 58 | 472 | 28 | 427 | 0.6865 |
0.7853 |
| AF-D4GP35-F1-model_v4 | 4 | 474 | 12 | 459 | 0.6329 |
0.6796 |
| AF-P58300-F1-model_v4 | 36 | 472 | 17 | 434 | 0.6231 |
0.6924 |
| AF-Q9V297-F1-model_v4 | 64 | 473 | 75 | 453 | 0.6101 |
0.753 |