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Cluster: HRGMv2_2331_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_19 18367 19365 + GT8
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_20 19375 20253 + GT2
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_21 20262 21242 + GT2
TC HRGMv2_2331_22 HRGMv2_2331_22_22 21242 22669 + 2.A.66.2.23
pfam HRGMv2_2331_22 HRGMv2_2331_22_23 22672 23679 + ATP-grasp_3 | ATP-grasp_4 | ATPgrasp_Ter | PylC-like_N
NULL(UNKNOWN) HRGMv2_2331_22 HRGMv2_2331_22_24 23693 24925 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_25 24922 25857 + GT2
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_26 25860 26552 + GT2
Gene ID: HRGMv2_2331_22_19
Type: CAZyme
Location: 18367 - 19365 (+)
Gene ID: HRGMv2_2331_22_20
Type: CAZyme
Location: 19375 - 20253 (+)
Gene ID: HRGMv2_2331_22_21
Type: CAZyme
Location: 20262 - 21242 (+)
Gene ID: HRGMv2_2331_22_22
Type: TC
Location: 21242 - 22669 (+)
Gene ID: HRGMv2_2331_22_23
Type: pfam
Location: 22672 - 23679 (+)
Gene ID: HRGMv2_2331_22_24
Type:
Location: 23693 - 24925 (+)
Gene ID: HRGMv2_2331_22_25
Type: CAZyme
Location: 24922 - 25857 (+)
Gene ID: HRGMv2_2331_22_26
Type: CAZyme
Location: 25860 - 26552 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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