PROTEIN: HRGMv2_2331_22_24
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Protein File & Metadata
Source:
HRGMv2_2331_22_24.pdb
Genome ID:
Protein ID:
HRGMv2_2331_22_24
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Protein Sequence
MDSKERSAYF WNMLGSLVYA VTSMLLGVAV TKLAGAYAGG VFFFGFSTLG QQLYIVSYFG 60 MRPIQVTDIS NEYTFCDYLR FRAMTSLLAV LAGFVYIVFM TNDSYVFEVY MILSLYKILD 120 GFCDIFESEM QRQDRLDMTG KATLFRTLFC VCIFLGILGI TGDLRLSSLA LLPSIAVAAL 180 VFDIIPLGRL NIDKSIKKSS YLSLLNKSKW LFLGAFIDLY IFAAAKYAVN YRLGEELNGY 240 FSIIFIPTSI INLMAGFIIR PILTKLSLLY KTGNKKNFVS TISKIAVFIF AATLFGMLAA 300 YLLGIPALKL VLGDVGSAIE PYRPALVLVI LGGGLYAIVN LGYYCLVIFE MTGVIFFIYV 360 VGAVFAYFFS DFMVKYFAMN GAALAYMITM SVLTVFFLIA VIFGLRKVKK 410
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71399-F1-model_v4 | 1 | 409 | 1 | 401 | 0.8559 |
0.884 |
| AF-P37746-F1-model_v4 | 1 | 410 | 2 | 415 | 0.8481 |
0.8729 |
| AF-P26400-F1-model_v4 | 1 | 409 | 6 | 430 | 0.8452 |
0.8855 |
| AF-Q2G1J8-F1-model_v4 | 1 | 410 | 1 | 400 | 0.8352 |
0.868 |
| AF-Q58770-F1-model_v4 | 1 | 410 | 1 | 415 | 0.8278 |
0.8528 |
| AF-Q32EG2-F1-model_v4 | 6 | 402 | 3 | 396 | 0.8212 |
0.86 |
| AF-Q57484-F1-model_v4 | 1 | 410 | 1 | 404 | 0.8202 |
0.8486 |
| AF-G3XD19-F1-model_v4 | 1 | 410 | 1 | 411 | 0.8197 |
0.8448 |
| AF-P9WLW1-F1-model_v4 | 1 | 408 | 24 | 432 | 0.8168 |
0.8599 |
| AF-P9WKX9-F1-model_v4 | 1 | 406 | 24 | 431 | 0.8143 |
0.8604 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 408 | 3 | 437 | 0.7884 |
0.8942 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 408 | 37 | 468 | 0.7551 |
0.877 |
| QNU38870.1 | GT4 | 1 | 408 | 1 | 409 | 0.7129 |
0.8626 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 1 | 410 | 1 | 432 | 0.6903 |
0.8845 |
| B1FZW0 | GT2 | 1 | 410 | 1 | 431 | 0.6873 |
0.8809 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 1 | 410 | 214 | 683 | 0.676 |
0.8579 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 1 | 410 | 158 | 682 | 0.6695 |
0.8519 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 1 | 410 | 220 | 687 | 0.6687 |
0.8531 |
| A0A836MCF6 | GT100 | 1 | 410 | 1 | 424 | 0.6683 |
0.8543 |
| A0A0J6W0G8 | GH16_3 | 1 | 410 | 17 | 427 | 0.6606 |
0.8429 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 408 | 3 | 437 | 0.7884 |
0.8942 |
| A0A160T2N7 | GT28 | 1 | 408 | 37 | 468 | 0.7551 |
0.877 |
| QNU38870.1 | GT4 | 1 | 408 | 1 | 409 | 0.7129 |
0.8626 |
| B1FZW0 | GT2 | 1 | 410 | 1 | 431 | 0.6873 |
0.8809 |
| A0A836MCF6 | GT100 | 1 | 410 | 1 | 424 | 0.6683 |
0.8543 |
| A0A0J6W0G8 | GH16_3 | 1 | 410 | 17 | 427 | 0.6606 |
0.8429 |
| A0A2U8PPB3 | GT4 | 1 | 407 | 1 | 405 | 0.6588 |
0.8991 |
| A0A543Z557 | GH16_5 | 1 | 408 | 2 | 436 | 0.658 |
0.8572 |
| A0A1V0ABA3 | GT4 | 1 | 410 | 70 | 790 | 0.6511 |
0.865 |
| A0A2W1ZQY8 | GT4 | 2 | 410 | 1 | 404 | 0.6471 |
0.8788 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 12 | 410 | 12 | 439 | 0.811 |
0.8802 |
| 7waw-assembly1.cif.gz_A | 10 | 408 | 1 | 428 | 0.7477 |
0.8559 |
| 7wag-assembly1.cif.gz_A | 1 | 410 | 1 | 438 | 0.7266 |
0.8292 |
| 5y50-assembly1.cif.gz_A | 1 | 408 | 5 | 438 | 0.7066 |
0.7674 |
| 6gwh-assembly1.cif.gz_A | 2 | 410 | 2 | 439 | 0.6907 |
0.7451 |
| 4mlb-assembly1.cif.gz_C | 4 | 410 | 4 | 451 | 0.6867 |
0.7516 |
| 3wbn-assembly1.cif.gz_A | 1 | 410 | 1 | 450 | 0.6854 |
0.7453 |
| 6hfb-assembly3.cif.gz_C | 2 | 410 | 3 | 450 | 0.684 |
0.7463 |
| 3w4t-assembly1.cif.gz_A | 2 | 410 | 2 | 446 | 0.6797 |
0.7383 |
| 5xjj-assembly1.cif.gz_A | 8 | 409 | 13 | 440 | 0.6797 |
0.7501 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39855-F1-model_v4 | 1 | 406 | 1 | 396 | 0.9108 |
0.9391 |
| AF-P71399-F1-model_v4 | 1 | 409 | 1 | 401 | 0.8559 |
0.884 |
| AF-Q99191-F1-model_v4 | 1 | 410 | 7 | 432 | 0.8513 |
0.891 |
| AF-P37746-F1-model_v4 | 1 | 410 | 2 | 415 | 0.8481 |
0.8729 |
| AF-Q45411-F1-model_v4 | 1 | 410 | 9 | 430 | 0.8462 |
0.8896 |
| AF-P26400-F1-model_v4 | 1 | 409 | 6 | 430 | 0.8452 |
0.8855 |
| AF-Q05347-F1-model_v4 | 1 | 410 | 1 | 433 | 0.845 |
0.8895 |
| AF-P37781-F1-model_v4 | 1 | 410 | 1 | 418 | 0.8413 |
0.8697 |
| AF-Q9CNC5-F1-model_v4 | 1 | 407 | 1 | 399 | 0.8361 |
0.8678 |
| AF-Q58770-F1-model_v4 | 1 | 410 | 1 | 415 | 0.8278 |
0.8528 |