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Cluster: HRGMv2_2326_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2326_1 HRGMv2_2326_1_132 147632 148954 + 3.A.1.1.28
NULL(UNKNOWN) HRGMv2_2326_1 HRGMv2_2326_1_133 148983 149213 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2326_1 HRGMv2_2326_1_134 149223 150377 + GH106
CAZyme HRGMv2_2326_1 HRGMv2_2326_1_135 150322 151422 + GH106
CAZyme HRGMv2_2326_1 HRGMv2_2326_1_136 151588 152646 - GH179
TF HRGMv2_2326_1 HRGMv2_2326_1_137 152671 153879 - MarR
CAZyme HRGMv2_2326_1 HRGMv2_2326_1_138 154323 155357 + GH177
TC HRGMv2_2326_1 HRGMv2_2326_1_139 155369 156658 + 3.A.1.1.21
TC HRGMv2_2326_1 HRGMv2_2326_1_140 156746 157627 + 3.A.1.1.45
TC HRGMv2_2326_1 HRGMv2_2326_1_141 157627 158454 + 3.A.1.1.42
Gene ID: HRGMv2_2326_1_132
Type: TC
Location: 147632 - 148954 (+)
Gene ID: HRGMv2_2326_1_133
Type:
Location: 148983 - 149213 (+)
Gene ID: HRGMv2_2326_1_134
Type: CAZyme
Location: 149223 - 150377 (+)
Gene ID: HRGMv2_2326_1_135
Type: CAZyme
Location: 150322 - 151422 (+)
Gene ID: HRGMv2_2326_1_136
Type: CAZyme
Location: 151588 - 152646 (-)
Gene ID: HRGMv2_2326_1_137
Type: TF
Location: 152671 - 153879 (-)
Gene ID: HRGMv2_2326_1_138
Type: CAZyme
Location: 154323 - 155357 (+)
Gene ID: HRGMv2_2326_1_139
Type: TC
Location: 155369 - 156658 (+)
Gene ID: HRGMv2_2326_1_140
Type: TC
Location: 156746 - 157627 (+)
Gene ID: HRGMv2_2326_1_141
Type: TC
Location: 157627 - 158454 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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