Cluster: HRGMv2_2326_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_10048
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_13 | HRGMv2_2326_13_14 | 10957 | 12081 | - | GT28 |
| pfam | HRGMv2_2326_13 | HRGMv2_2326_13_15 | 12183 | 13178 | - | Asparaginase | Asparaginase_C |
| pfam | HRGMv2_2326_13 | HRGMv2_2326_13_16 | 13196 | 14416 | - | ABC2_membrane_3 |
| TC | HRGMv2_2326_13 | HRGMv2_2326_13_17 | 14413 | 15330 | - | 3.A.1.147.2 |
Gene ID: HRGMv2_2326_13_14
Type: CAZyme
Location: 10957 - 12081 (-)
Type: CAZyme
Location: 10957 - 12081 (-)
Gene ID: HRGMv2_2326_13_15
Type: pfam
Location: 12183 - 13178 (-)
Type: pfam
Location: 12183 - 13178 (-)
Gene ID: HRGMv2_2326_13_16
Type: pfam
Location: 13196 - 14416 (-)
Type: pfam
Location: 13196 - 14416 (-)
Gene ID: HRGMv2_2326_13_17
Type: TC
Location: 14413 - 15330 (-)
Type: TC
Location: 14413 - 15330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.