Cluster: HRGMv2_2326_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_10 | HRGMv2_2326_10_39 | 43367 | 45595 | - | GH3 |
| TF | HRGMv2_2326_10 | HRGMv2_2326_10_40 | 45621 | 47216 | - | 0035607 | 0036286 |
| TC | HRGMv2_2326_10 | HRGMv2_2326_10_41 | 47194 | 48930 | - | 9.B.33.1.1 |
| TC | HRGMv2_2326_10 | HRGMv2_2326_10_42 | 48935 | 49837 | - | 3.A.1.1.29 |
| TC | HRGMv2_2326_10 | HRGMv2_2326_10_43 | 49850 | 50788 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2326_10_39
Type: CAZyme
Location: 43367 - 45595 (-)
Type: CAZyme
Location: 43367 - 45595 (-)
Gene ID: HRGMv2_2326_10_40
Type: TF
Location: 45621 - 47216 (-)
Type: TF
Location: 45621 - 47216 (-)
Gene ID: HRGMv2_2326_10_41
Type: TC
Location: 47194 - 48930 (-)
Type: TC
Location: 47194 - 48930 (-)
Gene ID: HRGMv2_2326_10_42
Type: TC
Location: 48935 - 49837 (-)
Type: TC
Location: 48935 - 49837 (-)
Gene ID: HRGMv2_2326_10_43
Type: TC
Location: 49850 - 50788 (-)
Type: TC
Location: 49850 - 50788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2326_10_43 | vegetarian > vegan | 1.06755 | 0.02258 |