Cluster: HRGMv2_2326_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_34 | 44221 | 46053 | + | GT2 | GT2 |
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_35 | 46069 | 47037 | + | GT2 |
| TC | HRGMv2_2326_9 | HRGMv2_2326_9_36 | 47361 | 48728 | + | 9.B.18.1.1 |
| pfam | HRGMv2_2326_9 | HRGMv2_2326_9_37 | 48747 | 49907 | + | LytR_cpsA_psr |
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_38 | 49976 | 50905 | + | GT2 |
Gene ID: HRGMv2_2326_9_34
Type: CAZyme
Location: 44221 - 46053 (+)
Type: CAZyme
Location: 44221 - 46053 (+)
Gene ID: HRGMv2_2326_9_35
Type: CAZyme
Location: 46069 - 47037 (+)
Type: CAZyme
Location: 46069 - 47037 (+)
Gene ID: HRGMv2_2326_9_36
Type: TC
Location: 47361 - 48728 (+)
Type: TC
Location: 47361 - 48728 (+)
Gene ID: HRGMv2_2326_9_37
Type: pfam
Location: 48747 - 49907 (+)
Type: pfam
Location: 48747 - 49907 (+)
Gene ID: HRGMv2_2326_9_38
Type: CAZyme
Location: 49976 - 50905 (+)
Type: CAZyme
Location: 49976 - 50905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.