Cluster: HRGMv2_2326_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_00064
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2326_9 | HRGMv2_2326_9_21 | 24232 | 25614 | + | 3.A.1.104.1 |
| TC | HRGMv2_2326_9 | HRGMv2_2326_9_22 | 25637 | 26971 | + | 3.A.1.103.6 |
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_23 | 27000 | 32639 | + | GT2 |
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_24 | 32615 | 35077 | + | GT2 | GT2 |
Gene ID: HRGMv2_2326_9_21
Type: TC
Location: 24232 - 25614 (+)
Type: TC
Location: 24232 - 25614 (+)
Gene ID: HRGMv2_2326_9_22
Type: TC
Location: 25637 - 26971 (+)
Type: TC
Location: 25637 - 26971 (+)
Gene ID: HRGMv2_2326_9_23
Type: CAZyme
Location: 27000 - 32639 (+)
Type: CAZyme
Location: 27000 - 32639 (+)
Gene ID: HRGMv2_2326_9_24
Type: CAZyme
Location: 32615 - 35077 (+)
Type: CAZyme
Location: 32615 - 35077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.