Cluster: HRGMv2_2326_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_00011
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2326_9 | HRGMv2_2326_9_7 | 7396 | 8178 | + | 3.A.1.103.1 |
| TC | HRGMv2_2326_9 | HRGMv2_2326_9_8 | 8179 | 8910 | + | 3.A.1.103.4 |
| pfam | HRGMv2_2326_9 | HRGMv2_2326_9_9 | 8940 | 10193 | + | Glyphos_transf |
| CAZyme | HRGMv2_2326_9 | HRGMv2_2326_9_10 | 10197 | 10913 | + | GT2 |
Gene ID: HRGMv2_2326_9_7
Type: TC
Location: 7396 - 8178 (+)
Type: TC
Location: 7396 - 8178 (+)
Gene ID: HRGMv2_2326_9_8
Type: TC
Location: 8179 - 8910 (+)
Type: TC
Location: 8179 - 8910 (+)
Gene ID: HRGMv2_2326_9_9
Type: pfam
Location: 8940 - 10193 (+)
Type: pfam
Location: 8940 - 10193 (+)
Gene ID: HRGMv2_2326_9_10
Type: CAZyme
Location: 10197 - 10913 (+)
Type: CAZyme
Location: 10197 - 10913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.