Cluster: HRGMv2_2326_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_04982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2326_1 | HRGMv2_2326_1_30 | 34251 | 35141 | + | 3.A.1.1.5 |
| TC | HRGMv2_2326_1 | HRGMv2_2326_1_31 | 35156 | 35977 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_2326_1 | HRGMv2_2326_1_32 | 36141 | 39290 | + | GH38 |
Gene ID: HRGMv2_2326_1_30
Type: TC
Location: 34251 - 35141 (+)
Type: TC
Location: 34251 - 35141 (+)
Gene ID: HRGMv2_2326_1_31
Type: TC
Location: 35156 - 35977 (+)
Type: TC
Location: 35156 - 35977 (+)
Gene ID: HRGMv2_2326_1_32
Type: CAZyme
Location: 36141 - 39290 (+)
Type: CAZyme
Location: 36141 - 39290 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.