dbCAN Logo

Cluster: HRGMv2_2326_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_105 109235 111499 + GH95
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_106 111527 113422 + GH35
TF HRGMv2_2326_6 HRGMv2_2326_6_107 113867 115801 + HTH_AraC | HTH_AraC
STP HRGMv2_2326_6 HRGMv2_2326_6_108 116048 117694 + SBP_bac_1
TC HRGMv2_2326_6 HRGMv2_2326_6_109 117710 118633 + 3.A.1.1.10
TC HRGMv2_2326_6 HRGMv2_2326_6_110 118658 119590 + 3.A.1.1.29
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_111 119672 120877 + GH109
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_112 120916 122118 + GH109
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_113 122153 125101 + GH2
pfam HRGMv2_2326_6 HRGMv2_2326_6_114 125266 126039 - DUF6062
pfam HRGMv2_2326_6 HRGMv2_2326_6_115 126345 127598 + PFK
TC HRGMv2_2326_6 HRGMv2_2326_6_116 127752 130376 + 4.A.2.1.17
Gene ID: HRGMv2_2326_6_105
Type: CAZyme
Location: 109235 - 111499 (+)
Gene ID: HRGMv2_2326_6_106
Type: CAZyme
Location: 111527 - 113422 (+)
Gene ID: HRGMv2_2326_6_107
Type: TF
Location: 113867 - 115801 (+)
Gene ID: HRGMv2_2326_6_108
Type: STP
Location: 116048 - 117694 (+)
Gene ID: HRGMv2_2326_6_109
Type: TC
Location: 117710 - 118633 (+)
Gene ID: HRGMv2_2326_6_110
Type: TC
Location: 118658 - 119590 (+)
Gene ID: HRGMv2_2326_6_111
Type: CAZyme
Location: 119672 - 120877 (+)
Gene ID: HRGMv2_2326_6_112
Type: CAZyme
Location: 120916 - 122118 (+)
Gene ID: HRGMv2_2326_6_113
Type: CAZyme
Location: 122153 - 125101 (+)
Gene ID: HRGMv2_2326_6_114
Type: pfam
Location: 125266 - 126039 (-)
Gene ID: HRGMv2_2326_6_115
Type: pfam
Location: 126345 - 127598 (+)
Gene ID: HRGMv2_2326_6_116
Type: TC
Location: 127752 - 130376 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List