Cluster: HRGMv2_2326_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_6 | HRGMv2_2326_6_41 | 42126 | 43631 | - | GH51_1 |
| pfam | HRGMv2_2326_6 | HRGMv2_2326_6_42 | 43931 | 44134 | - | DUF1858 |
| pfam | HRGMv2_2326_6 | HRGMv2_2326_6_43 | 44131 | 44682 | - | Isochorismatase |
| CAZyme | HRGMv2_2326_6 | HRGMv2_2326_6_44 | 44942 | 46795 | + | GH20 |
| CAZyme | HRGMv2_2326_6 | HRGMv2_2326_6_45 | 46798 | 49236 | + | GH2 |
| TC | HRGMv2_2326_6 | HRGMv2_2326_6_46 | 49271 | 51259 | + | 9.B.142.1.2 |
Gene ID: HRGMv2_2326_6_41
Type: CAZyme
Location: 42126 - 43631 (-)
Type: CAZyme
Location: 42126 - 43631 (-)
Gene ID: HRGMv2_2326_6_42
Type: pfam
Location: 43931 - 44134 (-)
Type: pfam
Location: 43931 - 44134 (-)
Gene ID: HRGMv2_2326_6_43
Type: pfam
Location: 44131 - 44682 (-)
Type: pfam
Location: 44131 - 44682 (-)
Gene ID: HRGMv2_2326_6_44
Type: CAZyme
Location: 44942 - 46795 (+)
Type: CAZyme
Location: 44942 - 46795 (+)
Gene ID: HRGMv2_2326_6_45
Type: CAZyme
Location: 46798 - 49236 (+)
Type: CAZyme
Location: 46798 - 49236 (+)
Gene ID: HRGMv2_2326_6_46
Type: TC
Location: 49271 - 51259 (+)
Type: TC
Location: 49271 - 51259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.